Overview
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Key numbers
The worker extracted the full PDF text with layout preservation twice and compared extraction hashes before commit. The following lines are copied from numeric/table-bearing regions of the PDF and retain the source units and wording where legible:
- impact the microbiota of weaning infants is essential for fos- using a standardised method (see ESI Table 1† for conditions).
- clinical trials.18 Among these methods, static in vitro protocols Table 2†).
- accounts for approximately 80% of their caloric intake.22 A
- A total of 13 food ingredients were used in this study (Table 1). To simulate oral digestion, 1.5 g of food ingredients were
- These included vegetables ( pumpkin), legumes (black beans, homogenised with 5 mL of deionised water and 5 mL of simu-
- were recruited for this study after written consent for their par- ether and 250 µL of hydrochloric acid (37%) were added to the
- tration of 32% (w/v). The resulting faecal slurry was filtered fermentation were diluted with 0.15 M potassium phosphate
- To ensure the absence of oxygen, 100 µL of 3% (w/v) L-cysteine increasing to 115 °C at a rate of 6 °C min−1, followed by a final
- using a 1% agarose gel and the lambda HindIII DNA marker diversity indices with significant differences, subsequent pair-
- measure the Chao1 richness estimator, Shannon index, and with more than 0.05% relative abundance were included in the
- least 10% of samples and had a relative abundance greater
- than 0.01%. 3.1. Changes in pH and gas pressure
- duction across samples (ESI Tables 6 and 7†). The type of fer-
- food ingredients alone (ESI Fig. 1 and 2†). tive abundances of 35%, 32%, 20%, and 10%. The most abun-
- lactate, and succinate. Isobutyrate, valerate, hexanoate, and dominant microbial taxa was observed (ESI Tables 9, 10, and
- propionate, and butyrate) (ANOVA one-way, p < 0.05). (ANCOM-BC2 global test, adjusted p < 0.05) (ESI Tables 9, 10,
- HSD, adjusted p < 0.05). The fermentation of kūmara, either Bacteroides (41% and 40%, respectively). In contrast, fermenta-
- red and lower values in blue. Samples with the same colour and letters belong to the same group according to the Tukey HSD test with a 95% confi-
- of these taxa, with Bacteroides accounting for 32%. The family increased the log-fold change (LFC) in the abundance of the
- tions with kūmara both peeled and with skin (0.08%). Importantly, LFC values represent differences in bias-correct
- strawberries (15%). Fermentations with peeled kūmara, black- Sellimonas and Eubacterium compared to fermentations with
- the genus Lacticaseibacillus. Fermentations with raspberries exhibited the lowest abundance of these taxa (35%). The
- Multiple pairwise comparisons against a reference group raspberries (1.2%) and the lowest in the fermentation with
- and the lowest in the fermentation with blackcurrants-kūmara kūmara peeled or kūmara with skin (19%). In contrast, the fer-
- with skin (20%). In contrast, the phylum Actinobacteria, the mentation of the combination blackcurrants-soybean exhibi-
- ted the highest abundances in the fermentation with black accounting for 6%. The families Eubacteriaceae and
- (ANCOM-BC 2 Dunnett’s test, adjusted p < 0.05), while no sig- peas-formula (43%) and the lowest in fermentation with black-
- nificant differences were observed at the phylum level (ESI currants-kūmara with skin-formula (32%). Additionally, fermen-
- microbial relative abundance between fermented samples. No (1.2% and 0.06%, respectively). In contrast, fermentation with
- Since the food-formula combinations consisted of 80% infant phytochemicals were not analysed, which is warranted in
- Cruciferous Vegetables to a Controlled Fruit- and 59 C. Liu, Y. Miao, J. Zhao, S. Yang, S. Cheng, W. Zhou,
Methods (brief)
- biota in digestion and have demonstrated the impact of tration of short-chain fatty acids (SCFAs).4,7 SCFAs are organic
- for food digestion and subsequent faecal fermentation of food
- remnants provide a useful screening approach to evaluate how 2.2 Simulated infant digestion of the food ingredients
- total of 53 samples, each with three replicates, were random-
- adapted to mimic the digestion of a 6-month-old infant.
- modified according to a dynamic model for infant digestion24
- 2.1. Food ingredients and a static model for newborn digestion.25
- A total of 13 food ingredients were used in this study (Table 1). To simulate oral digestion, 1.5 g of food ingredients were
- volume to 40 mL. Intestinal digestion was simulated by incu- Hungate tubes was measured (in kPa) using the Go Direct®
- tic lipase, 100 U mL−1 of amyloglucosidase, and 10 mmol L−1 pH of samples at the start and end of fermentation was
- Intestinal digestion was stopped by heat treatment were collected and centrifuged at 13 000g for 1 min using the
- (3 minutes at 95 °C). After digestion, nutrient absorption in Minispin Plus mini centrifuge (Eppendorf, Hamburg,
- the large intestine was simulated by placing digested samples Germany). The supernatants and pellets were recovered and
- dialysis samples were stored at −20 °C until fermentation. 2.5. Organic acids analysis
- ticipation was obtained from their primary caregivers. The mixture. Samples were vortexed, and 100 µL of the diethyl
- Participants donated multiple faecal samples and were pro- Standard solutions of the organic acids formate, acetate,
- tions on collecting and storing the stool samples. Samples ate, heptanoate, lactate, and succinate, containing 5 mM
- were preferentially collected fresh after defaecation and trans- 2-ethyl butyric acid were prepared alongside the samples. The
Implications
This page makes the source discoverable for category-level evidence routing. Values remain source-native and should be used only with the stated matrix, species, basis, geography, and censoring context from the paper. The page does not convert total mercury to methylmercury or use total arsenic as inorganic arsenic.
Wiki pages this source may touch
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- Tin
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Update history
The five most recent substantive edits to this page, classified major (evidence or structure moved), correction (a published value or statement was wrong and has been fixed), or minor (narrative rewritten without changing the underlying evidence). Each description is derived from what the edit did to this page; the linked commit is the authoritative record, routine regeneration passes are excluded, and the full version history lives in git. When DOI minting comes online (see schema docs), each entry below will also link to a version-pinned DataCite DOI.